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Home » Muffins

Gluten-Free Chocolate Muffins

Aug 23, 2024 · 2 Comments

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These gluten-free chocolate muffins have just the right amount of sweetness and chocolate. They’re dense without being heavy. And the best part? The simple recipe only takes a few minutes to make. For an added chocolate boost, I stir in some dark chocolate chips right before baking.

Gluten-free chocolate muffins, topped with chocolate chips, sit on a plate.

In my opinion, a good muffin must set itself apart from a cupcake. It can’t be too sweet or cakey. I want a muffin that’s equally at home at breakfast or after dinner when I’m craving “something a little sweet.” 

These gluten-free chocolate muffins meet all those requirements and more. Thanks to their rich flavor, they’re irresistible and always taste like an extra special treat.

Ingredients

Gluten-free chocolate muffin ingredients measured and placed on a sheet pan.

Here’s what you need to make a batch of these muffins. If you want to make them dairy-free, follow the substitutions listed.

  • Gluten-Free Flour. I tested the recipe with Bob’s Red Mill 1:1 Gluten-Free Baking Flour. Other gluten-free flour blends might change the texture. Coconut or almond flour won’t work in this recipe. 
  • Sugar. Granulated sugar adds the perfect sweetness.
  • Cocoa Powder. You can use either natural or Dutch process cocoa in this recipe. 
  • Butter. For a dairy-free version, use either dairy-free butter or oil.
  • Eggs. Two eggs give the muffins flavor, structure, and keep the muffins moist. 
  • Milk. Brings the batter together. Use traditional or dairy-free. Full fat coconut milk won’t work because it’s so rich.
  • Chocolate Chips. A cup of chocolate chips are optional but I never skip them! 
  • Vanilla extract. Adds flavor. 
  • Baking Powder. Makes the muffins rise. 
  • Salt. Enhances all the flavors.

How to Make Gluten-Free Chocolate Muffins

(Left) Ingredients for gluten-free chocolate muffin recipe in a large bowl. (right) Gluten-free chocolate muffin batter with a whisk.

Mix together the dry ingredients in a large bowl. Then add the melted butter, eggs, milk, and vanilla extract. Stir until a thick batter forms. If you’re adding chocolate chips, stir them in after you’ve mixed the batter.

Gluten-free chocolate muffin batter in a muffin pan.

Lightly grease a muffin pan with gluten-free cooking spray. Line it with paper liners. Spoon the batter into the pan. You want to fill each up about ⅔ full. I like to sprinkle some extra chocolate chips on top of the batter. This is batter but adds a nice extra chocolate flavor?

Baker’s Tip: Let the Batter Rest Before Baking

If you’ve got time, chill the batter for about 30 minutes. This helps the gluten-free flour absorb liquids and makes for a tender crumb with a nice rise.

Whether you chill the batter or not, you want to bake the cupcakes until a toothpick inserted into the center comes out clean. That’s how you’ll know they’re done.

It’s fine if a few moist crumbs stick to the toothpick. You don’t want to see any wet batter. If there’s batter when you test them, bake for a few more minutes.

Gluten-free chocolate muffins, topped with chocolate chips, sit on a plate.
4.5 from 2 votes
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Gluten-Free Chocolate Muffins

These gluten-free chocolate muffins are dense, rich, and filled with chocolate flavor. It’s a one-bowl recipe! Simply mix the dry ingredients, add the wet ingredients and stir until a batter forms. If you’ve got time, chill the batter for 30 minutes. It gives the muffins an extra-tender texture.
Prep Time 10 minutes
Cook Time 22 minutes
Total Time 32 minutes
Servings 12 muffins

Ingredients

  • 1 ½ cups gluten-free flour, see note (6 ¾ ounces; 195 grams)
  • ¾ cup granulated sugar (5 1/4 ounces; 150 grams)
  • ½ cup cocoa powder (1 ½ ounces; 50 grams)
  • 1 ½ teaspoons baking powder
  • ½ teaspoon salt
  • 2 large eggs
  • ¾ cup milk, traditional or dairy-free (6 ounces; 170 grams)
  • ½ cup melted butter or oil (4 ounces; 113 grams)
  • 1 cup chocolate chips, traditional or dairy-free (6 ounces; 170 grams)

Instructions

  1. Preheat the oven to 350℉. Line 12 standard muffin cups with paper liners. Lightly grease the top of the pan to keep the muffins from sticking.
  2. In a large bowl, whisk together the gluten-free flour, cocoa powder, baking powder, and salt. Add the eggs, milk, and melted butter. Mix until a thick batter forms. Stir in chocolate chips.

  3. Optional: Chill the batter for 30 minutes. This gives the muffin a more tender texture.

  4. Fill muffin cups ⅔ full. Sprinkle chocolate chips on top of each muffin.
  5. Bake until muffins are set and a cake tester inserted into the center comes out clean, about 25 minutes.
  6. Cool the muffins in the pan for about 10 minutes. Then remove and let them cool completely.
  7. Store muffins covered on the counter for up to three days or freeze cooled muffins for up to three months.

Recipe Notes

Gluten-free Flour: This recipe was tested with Bob’s Red Mill 1:1 Gluten-Free Baking Flour. Using a different flour might change the texture. 

Reader Interactions

Comments

  1. Abigale says

    October 02, 2024 at 9:19 pm

    4 stars
    Delicious! I made them for my family and they came out tasting great! I baked them for 20 minutes instead of 25, but they were still kind of dry. I’d recommend doing 18 minutes unless you prefer dry muffins. Other than that, they were great. Will definitely be making these again.

    Reply
  2. Tom says

    March 19, 2025 at 11:35 pm

    5 stars
    Really great recipe! Nice dense and moist muffins that freeze well. Definitely recommend baking for 20 instead mins and probing with a toothpick to test. Used vegetable oil and almond milk and they turned out excellent. Bob’s GF 1 to 1 is a miracle for baking.

    Reply

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Elizabeth Barbone

I'm Elizabeth. Welcome to GlutenFreeBaking.com --- a judgment-free baking space. Here you'll find easy recipes, product reviews, and other good stuff that makes gluten-free living easy and a lot more fun!

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